Package: indicspecies 1.7.15

Miquel De Cáceres

indicspecies: Relationship Between Species and Groups of Sites

Functions to assess the strength and statistical significance of the relationship between species occurrence/abundance and groups of sites [De Caceres & Legendre (2009) <doi:10.1890/08-1823.1>]. Also includes functions to measure species niche breadth using resource categories [De Caceres et al. (2011) <doi:10.1111/J.1600-0706.2011.19679.x>].

Authors:Miquel De Cáceres [aut, cre], Florian Jansen [aut], Noah Dell [aut]

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indicspecies.pdf |indicspecies.html
indicspecies/json (API)
NEWS

# Install 'indicspecies' in R:
install.packages('indicspecies', repos = c('https://emf-creaf.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/emf-creaf/indicspecies/issues

Datasets:

On CRAN:

9.09 score 8 stars 4 packages 316 scripts 2.0k downloads 218 mentions 19 exports 1 dependencies

Last updated 3 months agofrom:fd85bc42c7. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 04 2024
R-4.5-winOKNov 04 2024
R-4.5-linuxOKNov 04 2024
R-4.4-winOKNov 04 2024
R-4.4-macOKNov 04 2024
R-4.3-winOKNov 04 2024
R-4.3-macOKNov 04 2024

Exports:combinespeciescoverageindicatorsmultipattnichecentroidnichedisplnicheoverlapnicheprefnichevarplot.indicatorsplotcoverageplotnichepredict.indicatorsprint.indicatorspruneindicatorssignassocstrassocsummary.indicatorssummary.multipatt

Dependencies:permute

Indicator species analysis

Rendered fromIndicatorSpeciesAnalysis.Rmdusingknitr::rmarkdownon Nov 04 2024.

Last update: 2024-08-21
Started: 2021-06-04

Usage of the niche metric functions (former 'resniche' package)

Rendered fromPigeonExample.Rmdusingknitr::rmarkdownon Nov 04 2024.

Last update: 2023-07-19
Started: 2021-06-04